Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq183258 95.1 2e-14 seq182810 84.2 3e-11 >seq183258 Length=7175 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 198935 GGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAG 198994 |||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||| | Sbjct 2223 GGCCCCATAGCTCAGTTGGTTAGAGCACGCGACTCATAATCGCTTTGTCGCTGGTTCAAA 2282 Query 198995 TCCAGTAGGGGCCACCA 199011 ||||| |||||||||| Sbjct 2283 TCCAGCTGGGGCCACCA 2299 >seq182810 Length=1907 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 198619 TTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCACTGGTTCGAATCCAGT 198678 ||||||||||||||||||||| || ||||||| ||| |||||| ||||||||||| || Sbjct 1681 TTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCTGT 1740 Query 198679 ACGGCGCACCA 198689 | | ||||||| Sbjct 1741 AGGACGCACCA 1751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739750799944600