Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq183044 86.0 6e-12 >seq183044 Length=3031 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 75123 ATATACTGGGTGCCGGACAAATGCAAGGCTTCATCACGAGCAATCAGTTCGATAATGTTG 75182 |||| ||| || |||| ||| || || ||||| ||||||||||| || | || || || Sbjct 1420 ATATGCTGAGTTCCGGTCAAGTGTAACGCTTCGTCACGAGCAATAAGCTTAATGATTTTA 1479 Query 75183 GTGTTGCCCAGCATTACCCCGCGCTCACCGAAGGCGAAGGAGCAGGCAAAGCTCACGTAG 75242 | || || ||| | ||||||| |||| ||||| || |||||||| |||||||| Sbjct 1480 GCATTACCTTCCATCAATTCGCGCTCTGCGAAAGCGAAAGAACAGGCAAAACTCACGTAA 1539 Query 75243 AAGCGGATCGCTTCCAGTGCGTTGA 75267 || || || ||||| | || |||| Sbjct 1540 AAACGTATTGCTTCTAACGCATTGA 1564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454345418873800