Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq157162 129 1e-24 >seq157162 Length=2207 Score = 129 bits (142), Expect = 1e-24 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | ||||| ||| | ||| | || || ||||| |||||| Sbjct 618 ATACCACCACGTAGACGCAATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCG 559 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| || | ||| || |||||||| ||||| ||||||| | |||||||| || Sbjct 558 GATAGAGTACGTCCATCTTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGT 499 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || ||||| | ||| | |||| ||| || || || | ||| Sbjct 498 GGGATACCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCG 439 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATTAGT 193369 || || | ||| || || || || ||||| ||||| || || ||||||||| | || || Sbjct 438 ACCTCCAAAGTGATGGTCTTGCCAGTTAGTGTTTTAACGAAAATTTGCATTGTGTTCGT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897593123084400