Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq183115 178 4e-40 >seq183115 Length=3769 Score = 178 bits (196), Expect = 4e-40 Identities = 215/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235 |||| || ||||||||||| | | || | ||| || ||||||||||||||| || | Sbjct 2382 GAGGTATAAACAAAGTAATTTTAGTTGGAAATCTGGGTCAAGACCCGGAAGTTCGCTACA 2441 Query 33236 TGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATA 33295 |||| |||||| ||||| ||| | | ||||| || ||||| ||| || | Sbjct 2442 TGCCGAATGGCGGTGCTGTTGCCAACATCACGCTGGCTACTTCAGAAAGCTGGCGTGACA 2501 Query 33296 AAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGC 33355 | ||| ||||||| |||||| |||| || ||||| || | ||| | || || |||| Sbjct 2502 AGCAAACTGGGGAAACTAAAGAGAAGACCGAGTGGCACCGTATTGTTTTGTTTGGCAAGC 2561 Query 33356 TGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAAT 33415 |||| || || ||||| || || || ||||||||||||||||| ||| | ||||| | Sbjct 2562 TGGCTGAAGTTGCTGGTGAGTATCTTCGCAAAGGCTCTCAGGTTTATATTGAAGGCGCAC 2621 Query 33416 TACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAA 33468 | | ||||| |||||||| |||||| || ||||||||||| ||||||||| Sbjct 2622 TGCAAACTCGTAAATGGACTGATCAAGCAGGGGTTGAAAAATATACTACTGAA 2674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151713855012060