Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq160806 82.4 6e-11 >seq160806 Length=2373 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 103655 CCCGAGTATGCAATAGAAGCTGCGCGTTTGCGCACTTTTACCGCGTGGCCGCGCGGTTTG 103714 || || ||||| || || || || ||||| || | ||| ||| ||||| ||| || Sbjct 618 CCTGAATATGCTATTGAGGCGGCACGTTTACGTTCATTTGCCGAATGGCCACGCAACATG 559 Query 103715 AAGCAACATCCCGAGATACTTGCCGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAA 103774 || || | ||| || |||||| || |||||||||||||| || |||| | || Sbjct 558 AAACAGCGTCCAGACCAACTTGCAGATGCTGGTTTCTTTTATACAGGCATTGGTGATCGC 499 Query 103775 GTCAAATGCTTTTACTGCAACGGCGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGG 103834 || || |||||| || | || || || ||||||| | ||||| || || ||| Sbjct 498 GTGAAGTGCTTTAGTTGTGGTTGTGGCCTAAAAGATTGGGATAATGATGATGAACCATGG 439 Query 103835 CAACAACACGCGCTTTGGTT 103854 |||| || ||||||||||| Sbjct 438 GAACAGCATGCGCTTTGGTT 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411919349924435