Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_022088.2 Length=163019 Score E Sequences producing significant alignments: (Bits) Value seq183157 87.8 2e-12 >seq183157 Length=4427 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 17105 GCCTGTTCAATATGATTAAGATATAAATGGACATCTCCGCCATTGTAAATTAATTCTCCT 17164 |||||||||| || || ||| ||||| | ||| |||||| | |||| || |||||| Sbjct 3570 GCCTGTTCAAGGTGGTTGCTATACAAATGAATATCACCGCCAATCCAAATAAAGTCTCCT 3511 Query 17165 ACTTCTAGACCGCATTCTAAAGCTATTAAGTGTAACAACAACCCATAACTAGCGATATTG 17224 |||||||| ||||| | | ||||| | || | || || | ||||||||| ||||| Sbjct 3510 ACTTCTAGGCCGCACTGTTGCGCTATCATATGCACCAGAAAGCTATAACTAGCAATATTA 3451 Query 17225 AATGCCAAACCGAGGAAGCTGTCATTCGAACGC 17257 |||| || || ||||| | ||| |||||| Sbjct 3450 AATGGCAGGCCAAGGAAAATATCACAGGAACGC 3418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520337870567800