Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq183115 122 2e-23 >seq183115 Length=3769 Score = 122 bits (134), Expect = 2e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || ||||| |||||||| || |||| || || | |||||| || || || | |||||| Sbjct 2595 CCTTTGCGAAGATACTCACCAGCAACTTCAGCCAGCTTGCCAAACAAAACAATACGGTGC 2536 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 || |||||||| || || || || || |||||||| |||| |||| || || ||| Sbjct 2535 CACTCGGTCTTCTCTTTAGTTTCCCCAGTTTGCTTGTCACGCCAGCTTTCTGAAGTAGCC 2476 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 || |||||||| || ||| |||| || ||| |||||| ||||||||||| | |||| Sbjct 2475 AGCGTGATGTTGGCAACAGCACCGCCATTCGGCATGTAGCGAACTTCCGGGTCTTGACCC 2416 Query 23719 AG 23720 || Sbjct 2415 AG 2414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138980032269540