Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq157162 120 2e-22 >seq157162 Length=2207 Score = 120 bits (132), Expect = 2e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||||| || ||||| ||||| || || || || | | || || Sbjct 604 ACGCAATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGATAGAGTACGTCC 545 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||||||| || | || | | ||| ||||| || || ||||| ||||| Sbjct 544 ATCTTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTGGGATACCTTCTTT 485 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || |||||| | ||||||| |||| | ||||| || | || || || | ||| | Sbjct 484 ATCCTG-AATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCGACCTCCAAAGTGA 426 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || |||||||||| |||||||| || || |||||| Sbjct 425 TGGTCTTGCCAGTTAGTGTTTTAACGAAAATTTGCATT 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384358655819595