Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_023574.1 Length=128546 Score E Sequences producing significant alignments: (Bits) Value seq183188 84.2 2e-11 >seq183188 Length=4836 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 68384 GGAGTTGTTCCAATCATGAAACTCTATGAAGATTCATTTTCATATGCCAATCAGTTGGGG 68443 || ||| | ||| | |||||| | ||||||||||||||||||||| ||||| | || Sbjct 3746 GGCGTTATCCCAGTTATGAAAATTCTTGAAGATTCATTTTCATATGCTAATCAACTAGGT 3805 Query 68444 ACAAGAAATGGGGCAGGAGTAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTC 68503 |||| | || || || | | |||| | ||||| ||| ||||||| | ||| Sbjct 3806 CAAAGACAAGGTGCTGGGGCAGTTTATTTAAATGTTCATCATCCAGATATTATGTTATTT 3865 Query 68504 CTCTCTACaaaaaaaGAAAATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGT 68563 | | |||| |||||||| || |||||| ||||| ||||| | | ||| | || Sbjct 3866 TTAGATTCAAAGCGTGAAAATGCAGATGAAAAAATTCGTATTAAATCAATGTCTTTAGGA 3925 Query 68564 GTTGTAGTTCCTGATA 68579 || || ||||||||| Sbjct 3926 GTAGTTATTCCTGATA 3941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410303767067965