Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq183044 100 3e-16 >seq183044 Length=3031 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 121695 ATATACTGAGTTCCTGACAAATGCAAGGCTTCATCACGAGCAATTAACTCGATGATGTTG 121754 |||| ||||||||| | ||| || || ||||| ||||||||||| | || ||||| || Sbjct 1420 ATATGCTGAGTTCCGGTCAAGTGTAACGCTTCGTCACGAGCAATAAGCTTAATGATTTTA 1479 Query 121755 GTATTGCCCAGCATAACCCCACGCTCACCGAAAGCGAAGGAGCAGGCAAAGCTCACGTAG 121814 | ||| || ||| | | ||||| |||||||||| || |||||||| |||||||| Sbjct 1480 GCATTACCTTCCATCAATTCGCGCTCTGCGAAAGCGAAAGAACAGGCAAAACTCACGTAA 1539 Query 121815 AAGCGGATAGCTTCGAGTGCGTTGA 121839 || || || ||||| | || |||| Sbjct 1540 AAACGTATTGCTTCTAACGCATTGA 1564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484915216888800