Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_024367.1 Length=75028 Score E Sequences producing significant alignments: (Bits) Value seq182917 86.0 3e-12 >seq182917 Length=2278 Score = 86.0 bits (94), Expect = 3e-12 Identities = 115/154 (75%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 59148 TGGTCGGAATGGAAGGATTCGAACCTTCGATTTCTCGGTCCCAAACCGAGCGACTTAACC 59207 ||||||| | | ||||||||||||| ||| |||||||||||||||||||| || ||| Sbjct 1255 TGGTCGGGAAGACAGGATTCGAACCTGCGACCTCTCGGTCCCAAACCGAGCG-CTCTACC 1313 Query 59208 AGACT-AGCCTACATTCCGCCTTGGTTGTGGTGGCTGGACTTGAACCAGCGACATTTCGA 59266 | || |||| |||| ||| |||| |||| ||||||||||| | || ||| || Sbjct 1314 AAGCTGAGCC-ACATCCCG--ATGGTGCGCCTGGCAGGACTTGAACCCACAACCTTTTGA 1370 Query 59267 TTATCGGTCGAACGCTCTA-CCAACTGAGCTACA 59299 | ||| |||| |||| |||| ||| ||||| Sbjct 1371 TCCGTAGTCAAACGATCTATCCAATTGATCTACA 1404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239428740758555