Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq183115 201 3e-47 >seq183115 Length=3769 Score = 201 bits (222), Expect = 3e-47 Identities = 192/246 (78%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||||||||||||| ||||||| || || ||| |||| | || |||||||| || || Sbjct 2372 ATGGCAAGCAGAGGTATAAACAAAGTAATTTTAGTTGGAAATCTGGGTCAAGACCCGGAA 2431 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || ||||| | || | ||||| || || || |||||||| | || || || || Sbjct 2432 GTTCGCTACATGCCGAATGGCGGTGCTGTTGCCAACATCACGCTGGCTACTTCAGAAAGC 2491 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || |||||||| || | | |||||||| || ||||||||||| || |||| Sbjct 2492 TGGCGTGACAAGCAAACTGGGGAAACTAAAGAGAAGACCGAGTGGCACCGTATTGTTTTG 2551 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| |||||||||||||||||||| || || ||||| ||||| ||||| ||||||||| Sbjct 2552 TTTGGCAAGCTGGCTGAAGTTGCTGGTGAGTATCTTCGCAAAGGCTCTCAGGTTTATATT 2611 Query 38434 GAAGGC 38439 |||||| Sbjct 2612 GAAGGC 2617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132609927863490