Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq157162 149 1e-30 >seq157162 Length=2207 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || || || || || ||||| || || ||||| || || | Sbjct 617 TACCACCACGTAGACGCAATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCGG 558 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||||| | | || ||||| | |||||| || || || ||||| | |||||||||||| | Sbjct 557 ATAGAGTACGTCCATCTTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTG 498 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| ||||| || ||||| ||||||||||| || || || || | Sbjct 497 GGATACCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCGA 438 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||||||| || |||||||| || | || || || || || |||||| Sbjct 437 CCTCCAAAGTGATGGTCTTGCCAGTTAGTGTTTTAACGAAAATTTGCATT 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979521411037005