Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq157162 91.5 3e-13 >seq157162 Length=2207 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||||||||| || || || ||||| | ||| Sbjct 404 AAAACACTAACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCGGACACCATTGAAAAT 463 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| ||||| || |||||||| || || || ||| | || || || Sbjct 464 GTCAAAGCTAAA-ATTCAGGATAAAGAAGGTATCCCACCAGATCAACAACGTCTAATTTT 522 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| || || |||||||||||| | ||| | |||| ||||| |||| || || || Sbjct 523 CGCCGGCAAACAATTGGAAGATGGACGTACTCTATCCGACTACAATATCCAAAAGGAATC 582 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| | || ||| | || || Sbjct 583 AACACTTCATTTGGTATTGCGTCTACG 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179045332629695