Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq183115 96.9 9e-16 >seq183115 Length=3769 Score = 96.9 bits (106), Expect = 9e-16 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 238 TTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGCGCGCC 297 |||||| || || ||||| || || || || ||| || || |||||||| ||||| Sbjct 2674 TTCAGTAGTATATTTTTCAACCCCTGCTTGATCAGTCCATTTACGAGTTTGCAGTGCGCC 2615 Query 298 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGCTTTCC 357 |||||| | |||| ||||||||| || |||| | || | ||| |||||||| || Sbjct 2614 TTCAATATAAACCTGAGAGCCTTTGCGAAGATACTCACCAGCAACTTCAGCCAGCTTGCC 2555 Query 358 GAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTTATCCTT 417 || | || | |||||||| || || || ||||| | ||||| || ||||| || Sbjct 2554 AAACAAAACAATACGGTGCCACTCGGTCTTCTCTTTAGTTTCCCCAGTTTGCTTGTCACG 2495 Query 418 CCAGGTTTCAGACGTGGC 435 |||| |||| || || || Sbjct 2494 CCAGCTTTCTGAAGTAGC 2477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135106881069270