Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq120559 84.2 3e-11 >seq120559 Length=3671 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 161602 ACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGA 161661 ||| ||||||||||||||| || ||||| |||||||||||| ||||||| ||| | || Sbjct 2253 ACGTGATTGGGGTCATGCTATGGATTATGTAGAGGCTATGTGGATGATGTTGCAATATGA 2194 Query 161662 AACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGACTTTGTAGA 161721 || ||| || | ||| ||||| || ||| || | || || || |||||||| Sbjct 2193 AAAGCCTACCGATTTTGTTATTGCTACTGGTGAAACGCATAGCGTACGTGAATTTGTAGA 2134 Query 161722 GGCATC-TGCTGAATACTTTGGTATGAAGATTGAGTGGCAGGGTGAAGGATTGGATGAAG 161780 || || | | | | | | |||| |||| |||||| || || ||| | |||||| Sbjct 2133 GGAGTCATTCAAATTTATAGGACGTGAA-ATTGTGTGGCAAGGCGAGGGAATCAATGAAG 2075 Query 161781 TGGGTATAGA 161790 |||| || || Sbjct 2074 TGGGCATTGA 2065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728257194424600