Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq66438 86.0 2e-11 >seq66438 Length=2923 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||||| || ||||| | || |||||||| || ||| || || ||||| ||||| Sbjct 1217 GCATTTGCTGCCGTTGAAGGCATATTCTTTAGCGGTAGTTTT-GCTTCGATCTTTTGGTT 1159 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 |||||| ||||| || |||| ||| |||| || || || || ||| || || || Sbjct 1158 GAAAAAACGTGGTCTAATGCCCGGCTTGACATTCTCCAATGAGCTAATCTCGCGTGATGA 1099 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||||| ||||| || || || ||||| Sbjct 1098 AGGTTTACATTGTGATTTTGCTTGTCT 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1584605845021275