Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq183150 140 3e-28 >seq183150 Length=4314 Score = 140 bits (154), Expect = 3e-28 Identities = 185/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 |||| |||| ||||||||||| ||||| |||||||||||||| || || |||||||| | Sbjct 496 GCACCTTACAACTGATTAAAGAGCACGGTTGTAAAGCGGGGCTAGTGTTAAACCCGGCTA 555 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 | || || ||| ||| ||||| || ||||| || || ||||| || || ||||||| | Sbjct 556 CTCCACTGAGTGTTCTTGATTATGTGATGGATAAGCTAGATGTAATTCTTTTGATGTCGG 615 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 | || ||||| || | | || || |||||||| || ||| | |||||||| ||| Sbjct 616 TTAATCCAGGTTTTAGTAGTCAATCATTTATTCCCGGTACACTGAACAAACTGCGTCAAG 675 Query 58257 TGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGA 58316 | || | | || | || || || ||| | |||||||| || ||||| || | Sbjct 676 TATGTAAACTAGTCGACCAGAGTGGCTATGATATTTGTCTGGAAGTTGATGGCGGTGTAA 735 Query 58317 AGGTGAACAATATCGGC 58333 | || | ||||||||| Sbjct 736 AAGTCGATAATATCGGC 752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470161897136600