Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq17222 120 8e-23 >seq17222 Length=1962 Score = 120 bits (132), Expect = 8e-23 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 9174 TTCACGCCTTCAATCACGTCATTGACGTATTGTTTGGTGATGCCACGGTCTACGGCCCAC 9233 ||||| || |||||||| |||| | ||| ||||||||| || || || ||||| Sbjct 299 TTCACCCCCTCAATCACATCATCTATGTAAGTTTTGGTGATATTTCGATCAACTGCCCAG 358 Query 9234 AGGTGTGCACGCAGCAGACTGTCATTGATGATGTCAGCCGTGCGAACCACGCACAGGAAC 9293 || || || ||||||||||| |||||||| | || || || | ||| ||| || Sbjct 359 AGATGAGCTCGCAGCAGACTATCATTGATTAAATCTGCAGTCCTTCTCACTGACAAAAAA 418 Query 9294 GCCCATTTCTGATCGCTGGAACAGGTGCGGTTGCCCCACAGGCGGAAACCGTCCTGGCGA 9353 ||||||||| || | ||||| || | |||||||| || | | | || | || || Sbjct 419 GCCCATTTCGAGTCATTTGAACATGTTCTATTGCCCCAAAGCCTGTAGCCATTTTGATGA 478 Query 9354 ATGATGGTGGTGACTTCGTTTTCATTCAGCAGGTTTGCACGGCTGGATGTGTCACCCAGG 9413 || || || || ||||| |||||||||| | ||||| | | | ||| | ||| || Sbjct 479 ATTATCGTTGTTACTTCATTTTCATTCAAGTGATTTGCTCTACAGTTTGTATTACCGAGC 538 Query 9414 GTGAAATCAATGGTTCGGGCCGTGCCCTGGATGCCATAGATTTCCTGGTTTGATGGTGAC 9473 || |||||||| || | | ||||| || |||| || || | ||||| ||||| Sbjct 539 GTAAAATCAATAGTCCTGCTTGTGCCAACAATACCATTTATCTCTTTATTTGAAGGTGAA 598 Query 9474 CACCAGAAACC 9484 |||||| || Sbjct 599 TGCCAGAATCC 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132919652238120