Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq183044 113 4e-20 >seq183044 Length=3031 Score = 113 bits (124), Expect = 4e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 23995 ATATACTGAGTTCCGGACAAATGCAAGGCTTCATCACGAGCAATCAGTTCAATAATGTTG 24054 |||| ||||||||||| ||| || || ||||| ||||||||||| || | ||| || || Sbjct 1420 ATATGCTGAGTTCCGGTCAAGTGTAACGCTTCGTCACGAGCAATAAGCTTAATGATTTTA 1479 Query 24055 GTGTTACCCAGCATTACGCCGCGCTCACCGAAAGCGAAGGAGCAGGCGAAGCTCACGTAG 24114 | ||||| ||| | ||||||| |||||||||| || ||||| || |||||||| Sbjct 1480 GCATTACCTTCCATCAATTCGCGCTCTGCGAAAGCGAAAGAACAGGCAAAACTCACGTAA 1539 Query 24115 AAACGGATCGCTTCCAGTGCATTGA 24139 ||||| || ||||| | ||||||| Sbjct 1540 AAACGTATTGCTTCTAACGCATTGA 1564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477916888194400