Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq183044 84.2 2e-11 >seq183044 Length=3031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/166 (72%), Gaps = 5/166 (3%) Strand=Plus/Plus Query 126600 CTGTGTGCCCTTCAAATGAAGCTGTTCATCACGAGCAATGAACTTCATGATTTTAGCATT 126659 ||| || || |||| || | | ||| ||||||||||| | ||| |||||||||||||| Sbjct 1425 CTGAGTTCCGGTCAAGTGTAACGCTTCGTCACGAGCAATAAGCTTAATGATTTTAGCATT 1484 Query 126660 ACCTTCCATGATTTCCATATTTTTATGGAAGTTGAAGGTACATGCAAAACTAACATAGAA 126719 ||||||||| | ||| | | ||| ||| | ||| |||||||| || || || Sbjct 1485 ACCTTCCATCAATTCGCGCTCT---GCGAAAGCGAAAGAACAGGCAAAACTCACGTAAAA 1541 Query 126720 ACGAATAGCTTCTAATGCGTTAATA-ACATGTAAGCAAAGATAAAG 126764 ||| || |||||||| || || | | |||| | ||| | |||||| Sbjct 1542 ACGTATTGCTTCTAACGCATTGACACTCATG-AGGCATATATAAAG 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530854519618600