Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq157162 150 1e-31 >seq157162 Length=2207 Score = 150 bits (166), Expect = 1e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||||||||| || || || || || |||||| | || || || | | Sbjct 388 AATGCAAATTTTCGTTAAAACACTAACTGGCAAGACCATCACTTTGGAGGTCGAGCCATC 447 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | ||| |||||| || ||||||||| | || |||||||| Sbjct 448 GGACACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGTATCCCACCAGATCA 507 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| |||| || |||||||||||| ||||||| | ||| ||| || ||| ||||| Sbjct 508 ACAACGTCTAATTTTCGCCGGCAAACAATTGGAAGATGGACGTACTCTATCCGACTACAA 567 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||| || || ||| | ||||| || || Sbjct 568 TATCCAAAAGGAATCAACACTTCATTTGGTATT 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337254517713860