Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq183157 140 5e-28 >seq183157 Length=4427 Score = 140 bits (154), Expect = 5e-28 Identities = 178/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAAT 99256 || || ||||| || || | || || |||||| |||| || || || ||||| || ||| Sbjct 2975 AAAAATGACCGCACTGGTATTGGGACTCTGTCTGTTTTTGGTCATCAAATGCGGTTTAAT 3034 Query 99257 CTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCAC 99316 | | |||||||||||||| ||||| || || || ||| | | || || ||||| Sbjct 3035 TTACGTGAAGGCTTTCCGCTAGTAACCACCAAAAAATGCCACCTACCCTCCATCATTCAT 3094 Query 99317 GAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTA 99376 ||| || | |||||||| | |||||||| ||| || ||| | || || ||| || Sbjct 3095 GAATTGTTATGGTTCCTCACTGGCGATACTAATATCGCTTATCTGAAAGAGAATAAAGTT 3154 Query 99377 ACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAG 99436 |||||||||| |||||| ||| || |||| |||||||| || ||||| || ||||| Sbjct 3155 TCTATTTGGGATGAATGGGCGAATGAAAATGGTGACCTCGGTCCAGTATATGGAAAACAA 3214 Query 99437 TGGCG 99441 ||||| Sbjct 3215 TGGCG 3219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714822446639000