Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq183115 150 5e-32 >seq183115 Length=3769 Score = 150 bits (166), Expect = 5e-32 Identities = 197/273 (72%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 |||||| || || ||||| ||| ||||||||||||||||| ||| |||| |||| Sbjct 2674 TTCAGTAGTATATTTTTCAACCCCTGCTTGATCAGTCCATTTACGAGTTTGCAGTGCGCC 2615 Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048 |||||| | |||| ||||||||| || || |||||||| | ||| ||||||||||| Sbjct 2614 TTCAATATAAACCTGAGAGCCTTTGCGAAGATACTCACCAGCAACTTCAGCCAGCTTGCC 2555 Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108 || | |||| |||||||| || |||| |||||| | ||| || || ||| || Sbjct 2554 AAACAAAACAATACGGTGCCACTCGGTCTTCTCTTTAGTTTCCCCAGTTTGCTTGTCACG 2495 Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168 ||| |||| | || || | ||| |||||||| || || || |||||||||||| Sbjct 2494 CCAGCTTTCTGAAGTAGCCAGCGTGATGTTGGCAACAGCACCGCCATTCGGCATGTAGCG 2435 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 ||||| || || | || | ||| || | ||| Sbjct 2434 AACTTCCGGGTCTTGACCCAGATTTCCAACTAA 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133724297005200