Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tephritis_20californica_20[genbank_20GCA_5F001017515.1_202015-06-01] 183,295 sequences; 342,257,700 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq157162 82.4 5e-11 >seq157162 Length=2207 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| |||| ||||| || ||||||||||| ||||| |||| || || | || Sbjct 601 CAATACCAAATGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGATAGAGTACGTCCATC 542 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| || || ||||| || || | ||| || ||||||| || | |||||| || || Sbjct 541 TTCCAATTGTTTGCCGGCGAAAATTAGACGTTGTTGATCTGGTGGGATACCTTCTTTATC 482 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | || || || | || | |||||||| | | || ||||||| || || || Sbjct 481 CTGAATTTTAGCTTTGACATTTTCAATGGTGTCCGATGGCTCGACCTCCAAAGTGATGGT 422 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || || || ||||| |||||||| Sbjct 421 CTTGCCAGTTAGTGTTTTAACGAAAATTTGCAT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359186214633015