Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq443 104 2e-17 >seq443 Length=6836010 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||||| || || |||| | | ||||||||||| || | ||| ||||| || | | Sbjct 505794 GATATTCCTTTCATGGCATTGCCTCCATGTCATTGTTTGTTTCAATTTTATGTAACTGAT 505735 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||| |||| ||||| | | | |||| ||||| | |||||||| | || ||||| ||| Sbjct 505734 GGTAAATTGTCCTGTCGACTCGACCAAAGATCAGCAGATATGGGTTTAGGAGTACCATTC 505675 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC 19139 || |||| | || | || | || | || | || ||||||||| ||||| | || Sbjct 505674 AATGTTGCCAGCTACTCTATTTTAACTCATATGATCGCACATGTTACAA-ACTTAGAGCC 505616 Query 19140 -GGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCAT 19187 ||||| || |||||| ||| || |||||||||||||| ||||||| Sbjct 505615 TGGAGAGTTCATTCATCAAATTGGTGATGCACATATTTATAAGAATCAT 505567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399500878999845