Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq443 104 2e-17
>seq443
Length=6836010
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019
||||| || || |||| | | ||||||||||| || | ||| ||||| || | |
Sbjct 505794 GATATTCCTTTCATGGCATTGCCTCCATGTCATTGTTTGTTTCAATTTTATGTAACTGAT 505735
Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079
||| |||| ||||| | | | |||| ||||| | |||||||| | || ||||| |||
Sbjct 505734 GGTAAATTGTCCTGTCGACTCGACCAAAGATCAGCAGATATGGGTTTAGGAGTACCATTC 505675
Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC 19139
|| |||| | || | || | || | || | || ||||||||| ||||| | ||
Sbjct 505674 AATGTTGCCAGCTACTCTATTTTAACTCATATGATCGCACATGTTACAA-ACTTAGAGCC 505616
Query 19140 -GGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCAT 19187
||||| || |||||| ||| || |||||||||||||| |||||||
Sbjct 505615 TGGAGAGTTCATTCATCAAATTGGTGATGCACATATTTATAAGAATCAT 505567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399500878999845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |