Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq443 156 3e-33
>seq443
Length=6836010
Score = 156 bits (172), Expect = 3e-33
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 101701 ATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATG 101760
||| || || ||||| || || ||| || |||||||||||| ||| || || |||||
Sbjct 505576 ATAAATATGTGCATCACCAATTTGATGAATGAACTCTCCAGGCTCTAAGTTTGTAACATG 505635
Query 101761 AGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCAT 101820
|| ||||| |||||||| ||| ||||| |||| || ||||| |||||||| |||||
Sbjct 505636 TGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATGGTACTCCTAAACCCAT 505695
Query 101821 ATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACT 101880
||| ||||||||||| | ||| ||||||| | || |||||| ||||||||||||
Sbjct 505696 ATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAGTTACATAAAATTGAAA 505755
Query 101881 TAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924
|| |||||| || ||||| |||| |||||| ||| |||
Sbjct 505756 CAAACAATGACATGGAGGCAATGCCATGAAAGGAATATCTTAAA 505799
Score = 118 bits (130), Expect = 8e-22
Identities = 236/348 (68%), Gaps = 4/348 (1%)
Strand=Plus/Plus
Query 101919 CTGAAACATTCCAAGCAC--ACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGT 101976
||| |||||||||||||| ||| ||| ||||| || | || || | ||| || |
Sbjct 505854 CTGCAACATTCCAAGCACTAACAATAAGT--CTTCTGTCGTTTGGATTCGATTTGATTTT 505911
Query 101977 ATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTT 102036
||||| | | ||| || ||||||| |||| || ||||| || | |
Sbjct 505912 TTCAATAACATTTTTCAACTGGTCAATACCTTGACCAGAATAATTTGTATTTGCATCAAT 505971
Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096
||||| || || |||| | ||| ||||| ||||| | ||| || | ||||||||| ||
Sbjct 505972 ATATTTGGCACCCCAATGTCGCCATTGAAACCCATAAATAGGACCTAAATCTCCTTCTTC 506031
Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156
||| || | ||||||| |||||||||| | | |||||||| ||||||||||| ||
Sbjct 506032 TCTATCTGAGAAACCAACAGAATCTAAAAATTCTTTCGATCCATTAGCATCCCAAATATG 506091
Query 102157 CACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTC 102216
|| || | || | |||||||| || ||| | || ||||||| |||||
Sbjct 506092 AACTCCTTTTTCTTGCAATATTTTGCTGTTTGTTTCCCCTTTAATGAACCACAGAAGTTC 506151
Query 102217 TTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
|| | || |||| |||| || | ||||| || |||||||| ||
Sbjct 506152 CTCCAACACTCCTCGAAAAAAAACACGTTTAGTTGTAAAAAGTGGTAA 506199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361248377837891
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |