Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq443 138 8e-28 >seq443 Length=6836010 Score = 138 bits (152), Expect = 8e-28 Identities = 173/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 97051 TCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTG-TGAATAAATTCTCCAGGAAC 97109 |||| |||||| |||||| || ||||| || || || ||||| || |||||||| | Sbjct 505562 TCAACATGATTCTTATAAATATGTGCATCACC-AATTTGATGAATGAACTCTCCAGGCTC 505620 Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169 ||| | || ||||| ||||||||| |||||| | ||| ||||| |||| || || || Sbjct 505621 TAAGTTTGTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATGG 505680 Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACA 97229 || |||| |||||||| ||||||||||| | | ||||||| | || |||||| Sbjct 505681 TACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAGT 505740 Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCT 97284 |||||||| ||| ||| |||||| || ||||| ||||| |||| |||| Sbjct 505741 TACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAAAGGAATATCT 505795 Score = 118 bits (130), Expect = 7e-22 Identities = 272/405 (67%), Gaps = 5/405 (1%) Strand=Plus/Plus Query 97288 ACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATT 97347 ||||||||||||| | | | |||||| ||| |||| || | | || | | ||| Sbjct 505859 ACATTCCAAGCACTAACAATAAGTCTTCTGTCGTTTGGATTCGATTTGATTTTTTCAATA 505918 Query 97348 ATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCT 97407 | | || || || |||| |||| ||| |||||| || | | ||||| Sbjct 505919 ACATTTTTCAACTGGTCAATACCTTGACCAGAATAATTTGTATTTGCATCAATATATTTG 505978 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467 || || |||| | |||||| || ||||||| ||| || | ||||||||||||||||| Sbjct 505979 GCACCCCAATGTCGCCATTGAAACCCATAAATAGGACCTAAATCTCCTTCTTCTCTATCT 506038 Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCA 97527 ||||||||| ||||||| | | |||||||| ||||||||||| || || || Sbjct 506039 GAGAAACCAACAGAATCTAAAAATTCTTTCGATCCATTAGCATCCCAAATATGAACTCCT 506098 Query 97528 GATGC-TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCAC 97586 | | ||||| | |||||||| || ||| | || ||||||| | ||| |||| Sbjct 506099 TTTTCTTGCAATAT-TTTGCTGTTTGTTTCCCCTTTAATGAACCACAGAAGTTCCTCCAA 506157 Query 97587 AACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGG--AAAATCC-TTTTCTAAGCT 97643 || |||| |||| || | |||||||| || || || || |||| | || || | Sbjct 506158 CACTCCTCGAAAAAAAACACGTTTAGTTGTAAAAAGTGGTAAACATCCATCTTTCAAATT 506217 Query 97644 GTATCTAGACTGCATTCCAAAAACACTCAATGTTCCAACTCCTGT 97688 ||| | | || || |||||||| | |||||||| || || Sbjct 506218 GTAACGATTTTGGATGCCAAAAACTGAAATGGTTCCAACGCCGGT 506262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781290858370