Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq443 138 8e-28
>seq443
Length=6836010
Score = 138 bits (152), Expect = 8e-28
Identities = 173/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 97051 TCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTG-TGAATAAATTCTCCAGGAAC 97109
|||| |||||| |||||| || ||||| || || || ||||| || |||||||| |
Sbjct 505562 TCAACATGATTCTTATAAATATGTGCATCACC-AATTTGATGAATGAACTCTCCAGGCTC 505620
Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169
||| | || ||||| ||||||||| |||||| | ||| ||||| |||| || || ||
Sbjct 505621 TAAGTTTGTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATGG 505680
Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACA 97229
|| |||| |||||||| ||||||||||| | | ||||||| | || ||||||
Sbjct 505681 TACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAGT 505740
Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCT 97284
|||||||| ||| ||| |||||| || ||||| ||||| |||| ||||
Sbjct 505741 TACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAAAGGAATATCT 505795
Score = 118 bits (130), Expect = 7e-22
Identities = 272/405 (67%), Gaps = 5/405 (1%)
Strand=Plus/Plus
Query 97288 ACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATT 97347
||||||||||||| | | | |||||| ||| |||| || | | || | | |||
Sbjct 505859 ACATTCCAAGCACTAACAATAAGTCTTCTGTCGTTTGGATTCGATTTGATTTTTTCAATA 505918
Query 97348 ATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCT 97407
| | || || || |||| |||| ||| |||||| || | | |||||
Sbjct 505919 ACATTTTTCAACTGGTCAATACCTTGACCAGAATAATTTGTATTTGCATCAATATATTTG 505978
Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467
|| || |||| | |||||| || ||||||| ||| || | |||||||||||||||||
Sbjct 505979 GCACCCCAATGTCGCCATTGAAACCCATAAATAGGACCTAAATCTCCTTCTTCTCTATCT 506038
Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCA 97527
||||||||| ||||||| | | |||||||| ||||||||||| || || ||
Sbjct 506039 GAGAAACCAACAGAATCTAAAAATTCTTTCGATCCATTAGCATCCCAAATATGAACTCCT 506098
Query 97528 GATGC-TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCAC 97586
| | ||||| | |||||||| || ||| | || ||||||| | ||| ||||
Sbjct 506099 TTTTCTTGCAATAT-TTTGCTGTTTGTTTCCCCTTTAATGAACCACAGAAGTTCCTCCAA 506157
Query 97587 AACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGG--AAAATCC-TTTTCTAAGCT 97643
|| |||| |||| || | |||||||| || || || || |||| | || || |
Sbjct 506158 CACTCCTCGAAAAAAAACACGTTTAGTTGTAAAAAGTGGTAAACATCCATCTTTCAAATT 506217
Query 97644 GTATCTAGACTGCATTCCAAAAACACTCAATGTTCCAACTCCTGT 97688
||| | | || || |||||||| | |||||||| || ||
Sbjct 506218 GTAACGATTTTGGATGCCAAAAACTGAAATGGTTCCAACGCCGGT 506262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346781290858370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |