Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq444 96.9 3e-15
>seq444
Length=5217058
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | || ||| |||||||| || || ||| || ||||||||||| ||| ||
Sbjct 3542377 CCACCACGAAGTCGTAAGACCAAGTGAAGGGTAGACTCTTTTTGAATGTTGTAATCGCTC 3542436
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || || || ||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 3542437 AGGGTACGTCCATCTTCAAGCTGTTTACCAGCGAAGATCAAACGCTGTTGATCGGGTGGG 3542496
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| |||||||| || || ||||| | | ||||| || |||
Sbjct 3542497 ATACCTTCCTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCCGATGGTTCAACC 3542556
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| | ||| || || || || || |||||||| || || ||||||||| ||
Sbjct 3542557 TCAAGGGTGATGGTTTTTCCAGTAAGAGTCTTGACGAAAATTTGCATGATG 3542607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072113598461
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |