Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq444 91.5 1e-13
>seq444
Length=5217058
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/243 (68%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 18083 ATTTTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142
|||||||| ||| || || || |||| | ||| | || | ||||||||||| ||
Sbjct 3541557 ATTTTCTTAAAGTTGACCACCACGAAGTCGTAATACTAAATGTAAAGTTGATTCTTTCTG 3541616
Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202
|||||||||||| | | ||| || ||| || | ||||| || || |||| || |
Sbjct 3541617 AATGTTGTAGTCAGAAAGGGTTCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGACG 3541676
Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGT 18262
|||||||| || | |||||||| || |||| |||||| | | ||| ||
Sbjct 3541677 CTGTTGATCAGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGT 3541736
Query 18263 GTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTG 18322
||| || || ||| | ||||||| |||| || || | ||||| || ||||||||
Sbjct 3541737 GTCGGAAGGTTCAACTTCCAAGGTGATGGTTTTACCAGTGAGGGTTTTGACGAAAATTTG 3541796
Query 18323 CAT 18325
|||
Sbjct 3541797 CAT 3541799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379341036493545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |