Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq444 91.5 1e-13 >seq444 Length=5217058 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 18083 ATTTTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142 |||||||| ||| || || || |||| | ||| | || | ||||||||||| || Sbjct 3541557 ATTTTCTTAAAGTTGACCACCACGAAGTCGTAATACTAAATGTAAAGTTGATTCTTTCTG 3541616 Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202 |||||||||||| | | ||| || ||| || | ||||| || || |||| || | Sbjct 3541617 AATGTTGTAGTCAGAAAGGGTTCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGACG 3541676 Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGT 18262 |||||||| || | |||||||| || |||| |||||| | | ||| || Sbjct 3541677 CTGTTGATCAGGTGGGATTCCTTCCTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGT 3541736 Query 18263 GTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTG 18322 ||| || || ||| | ||||||| |||| || || | ||||| || |||||||| Sbjct 3541737 GTCGGAAGGTTCAACTTCCAAGGTGATGGTTTTACCAGTGAGGGTTTTGACGAAAATTTG 3541796 Query 18323 CAT 18325 ||| Sbjct 3541797 CAT 3541799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341036493545