Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq444 84.2 2e-11 >seq444 Length=5217058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 5320 TTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAA 5379 ||| || ||||||||||| || || ||||| || ||||| | || || | |||||| Sbjct 5155815 TTCACAAATTAGCTGAGCAATTCTATCTCCTTTTTTAACTTGGAAATCTGAATCTCCGAA 5155756 Query 5380 GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCAC 5439 || |||| | || || ||||| |||| ||| || |||| ||||| || || || || Sbjct 5155755 ATTGAACAAGATAACTCCAACATTACCTCTGTAATCAGCGTCAATAACACCTGCTCCAAC 5155696 Query 5440 GTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGG 5499 || || | ||||| | || | || || ||||| || || | || || |||||| Sbjct 5155695 ATCAATCGAATGTTTAAGAGCTAATCCAGATCGTGGAGCAATTCTACCATAACAACCATC 5155636 Query 5500 TGGGAGCTTTATCAGAAGGTCAGT 5523 ||| | | |||| | || ||||| Sbjct 5155635 TGGCACTTGTATCTGTAGATCAGT 5155612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447746812399920