Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq444 86.0 5e-12
>seq444
Length=5217058
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 48514 TAACACTAAATG--AAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
||| |||||||| |||| || | || || ||||||||||| |||| | ||| |
Sbjct 3541587 TAATACTAAATGTAAAGT-TGAT-TCTTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCA 3541644
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
||||| ||||| ||||| || | || | |||||| ||||| || | | |||||||
Sbjct 3541645 TCCTCAAGCTGTTTACCAGCGAAGATGAGACGCTGTTGATCAGGTGGGATTCCTTCCTTG 3541704
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
|| ||||| ||||| | | ||||| |||| || || || | || |||
Sbjct 3541705 TCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTGATG 3541764
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| ||||| ||||| || ||||| |||||
Sbjct 3541765 GTTTTACCAGTGAGGGTTTTGACGAAAATTTGCAT 3541799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421247909106641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |