Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq469 84.2 1e-11 >seq469 Length=1077722 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || |||||| | ||| |||||| ||||||||||||||||||||||| Sbjct 804727 AAAAAATTAA-TTGGCCATTATGAGGGTCGAACTCATGACCTTCGCGTTATTAGCACGAC 804669 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||| |||||||||| ||||| Sbjct 804668 GCTCTAACCGACTGAGCTAAACGGCCG 804642 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261489157181716