Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq450 174 3e-38
>seq450
Length=3639652
Score = 174 bits (192), Expect = 3e-38
Identities = 358/529 (68%), Gaps = 10/529 (2%)
Strand=Plus/Plus
Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700
|||| ||| || || ||| | | |||||||| ||||| |||||||| || ||| ||
Sbjct 785288 CCTGATGAAATATACAATTTAGCAGCTCAAAGCCATGTCAAAGTTTCATTCGAGCTGAGT 785347
Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATG 193760
|| |||||| | ||||| ||||| | |||||| | ||| || | || || | | |
Sbjct 785348 GAATATACTGCAAATGTAGATGCAATTGGAACTTTAAGAGTATTAGATGCTATCAGAAGC 785407
Query 193761 TTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGT 193820
| ||| ||| | | ||| | ||||| ||||| || || ||||| ||||||
Sbjct 785408 TGTGGATTGGGAACCAAAGTTAAATTTTATCAAGCATCAACTAGTGAACTTTATGGTAAA 785467
Query 193821 GTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTA 193880
|| | || | |||| | |||| ||||| || ||||| | || ||||| |||||
Sbjct 785468 GTCCAAGAAATACCACAAAATGAAAAAACACCTTTCTATCCAAGATCGCCTTACGGTGTT 785527
Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATA----TGGATTCCA 193936
|| || ||||||||||| ||||| | || |||||||| |||| | || ||
Sbjct 785528 GCTAAATTGTATGGTTACTGGATAGTTGTCAACTATCGTGAAGCATACAACATGTTTGCA 785587
Query 193937 CGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAAC 193996
| | ||||||| | || ||||| ||| || ||||||||||| || ||||| ||
Sbjct 785588 GTCAA----TGGTATTTTATTTAATCATGAAAGCCCTAGAAGAGGTGAAACTTTTGTTAC 785643
Query 193997 TCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCT 194056
||||| ||||| |||| | | ||||| ||| | || | | | | | ||
Sbjct 785644 CCGTAAAATTACTAGAGGTGTTGCCAAGATTTCTATCGGTGAGTTGGACTATATCGAACT 785703
Query 194057 TGGTAATCTTA-ATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGT 194115
||||| |||| | || || || || ||||| || || || |||||||||||||| ||||
Sbjct 785704 AGGTAA-CTTAGACGCCAAAAGAGACTGGGGTCATGCGAAAGATTATGTTGAAGCTATGT 785762
Query 194116 GGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
|| | ||| | || || || | || || |||| ||||| || || ||
Sbjct 785763 GGCTCATGCTTCAGCAAGACAAGCCTGAAGATTTCGTGATAGCCACTGG 785811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807548729463960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |