Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq444 98.7 1e-15
>seq444
Length=5217058
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | ||||||||| | |||||| | || | ||| ||
Sbjct 3542603 ATGCAAATTTTCGTCAAGACTCTTACTGGAAAAACCATCACCCTTGAGGTTGAACCATCG 3542544
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || ||| ||||| ||||| ||||| || || |||||||||
Sbjct 3542543 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCACCCGATCAA 3542484
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | || | || || ||||| || ||||||| | | | | ||||| || |||
Sbjct 3542483 CAGCGTTTGATCTTCGCTGGTAAACAGCTTGAAGATGGACGTACCCTGAGCGATTACAAC 3542424
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| ||||| | || ||||| | ||||| | || ||
Sbjct 3542423 ATTCAAAAAGAGTCTACCCTTCACTTGGTCTTACGACTTCGTGGTGG 3542377
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || |||||||| | ||||| || | || || | || | ||| |
Sbjct 3542028 AATGCAAATTTTCGTAAAAACTCTTACTGGTAAGACCATTACACTTGAGGTTGAACCTTC 3541969
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|| || || || | || ||| || || ||||||||||| || || || || ||
Sbjct 3541968 TGATACTATTGAAAACGTGAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCA 3541909
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|||| | | || | || || ||||| ||||| || | | | | |||| || |||||
Sbjct 3541908 ACAACGTTTGATCTTCGCTGGTAAACAGCTCGAGGACGGTCGTACTCTCAGTGATTATAA 3541849
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||||||||| | || ||||| || ||||| | || ||
Sbjct 3541848 TATTCAAAAAGAATCTACCCTTCACTTGGTCTTGCGACTTCGTGGTGG 3541801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478658564717520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |