Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq466 96.9 7e-15
seq451 96.9 7e-15
seq452 89.7 1e-12
>seq466
Length=1126313
Score = 96.9 bits (106), Expect = 7e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 577330 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGGCTCTTAACCTCAGGGTCGTGGGTTCGAG 577389
Query 142563 CCCCACATCGGGC 142575
|||||||||||||
Sbjct 577390 CCCCACATCGGGC 577402
>seq451
Length=2993488
Score = 96.9 bits (106), Expect = 7e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| |||||||||||||||||||||||||| || ||||||| || ||||||||||||
Sbjct 1198449 GAAAGCCCGGTTAGCTCAGTCGGTAGAGCATGAGGCTCTTAACCTCAGGGTCGTGGGTTC 1198390
Query 142560 GAGCCCCACATCGGGC 142575
||||||||||||||||
Sbjct 1198389 GAGCCCCACATCGGGC 1198374
>seq452
Length=2717137
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| || ||||||| || ||||||||||||||||
Sbjct 2525808 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGGCTCTTAACCTCAGGGTCGTGGGTTCGAGC 2525749
Query 142564 CCCACATCGGGC 142575
||||||| ||||
Sbjct 2525748 CCCACATTGGGC 2525737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027828358569081
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |