Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq443 111 1e-19 >seq443 Length=6836010 Score = 111 bits (122), Expect = 1e-19 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 20176 CTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTG-TGAATAAACTCCCCGGG-T 20233 ||| | ||| | || || || || ||||| || || || ||||| ||||| || || | Sbjct 505561 CTCAACATGATTCTTATAAATATGTGCATCACC-AATTTGATGAATGAACTCTCCAGGCT 505619 Query 20234 CTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAA 20293 ||||| |||||||| || | ||||| |||||| | || |||||||||| || || Sbjct 505620 CTAAGTTT-GTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAAT 505678 Query 20294 GGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCA 20353 || ||||| |||||||| ||| | || || || | || ||||||| | | ||| ||| Sbjct 505679 GGTACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCA 505738 Query 20354 GCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAA 20400 | ||||||||||||| | || | ||||| || || | ||||| || Sbjct 505739 GTTACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAA 505785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369263500440