Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq443 111 1e-19
>seq443
Length=6836010
Score = 111 bits (122), Expect = 1e-19
Identities = 164/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 20176 CTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTG-TGAATAAACTCCCCGGG-T 20233
||| | ||| | || || || || ||||| || || || ||||| ||||| || || |
Sbjct 505561 CTCAACATGATTCTTATAAATATGTGCATCACC-AATTTGATGAATGAACTCTCCAGGCT 505619
Query 20234 CTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAA 20293
||||| |||||||| || | ||||| |||||| | || |||||||||| || ||
Sbjct 505620 CTAAGTTT-GTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAAT 505678
Query 20294 GGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCA 20353
|| ||||| |||||||| ||| | || || || | || ||||||| | | ||| |||
Sbjct 505679 GGTACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCA 505738
Query 20354 GCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAA 20400
| ||||||||||||| | || | ||||| || || | ||||| ||
Sbjct 505739 GTTACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAA 505785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441369263500440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |