Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq444 109 1e-18
>seq444
Length=5217058
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| | || | || | ||| || || || || | ||||||||||| | ||
Sbjct 3541579 CGAAGTCGTAATACTAAATGTAAAGTTGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTT 3541638
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||| || || ||||||||||||||||| || || || ||||||
Sbjct 3541639 CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGACGCTGTTGATCAGGTGGGATTCCT 3541698
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || || || ||| || ||| | |||||| | | ||| || |||||
Sbjct 3541699 TCCTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAG 3541758
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| ||||| ||||| || ||||||||
Sbjct 3541759 GTGATGGTTTTACCAGTGAGGGTTTTGACGAAAATTTG 3541796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178911917737947
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |