Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq442 156 2e-33
>seq442
Length=7801961
Score = 156 bits (172), Expect = 2e-33
Identities = 299/435 (69%), Gaps = 7/435 (2%)
Strand=Plus/Plus
Query 25924 AACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCAT 25983
|||| ||||||||| | || || | ||| | || |||| ||||||| ||||||||
Sbjct 3252831 AACTCGCTCCATAAAAAGATTAGGCACCCAAAGAGCTAAAAACAAATCTCGAGCTCTCAT 3252890
Query 25984 TTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATG 26042
|||||||| || ||| || || || || || ||||||||| | ||| | ||||| |
Sbjct 3252891 CTCTTCTTTACCAGTGTTTTTTCTTAAGCA-TAGGAAATCAAAGACATCAGCATGCCAAG 3252949
Query 26043 GTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTG 26102
| || | ||| |||||| || ||| || ||| || || ||| | || || | |
Sbjct 3252950 GCTCAATATAAATAGCATAAGCTCCTGGTCGTTTACCCCC---TTGGTTGACATAACGAG 3253006
Query 26103 CAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC-TA 26161
||| |||||| || | ||||| ||| || || | ||| || || || ||||| | |
Sbjct 3253007 CAGATTCATTAAACATTTTCAGCATAGGCACGAGACCATCAGAGAAACCATTTGTCCCTC 3253066
Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221
||| || || |||| ||| || |||| ||| ||| | ||| ||||||||||| ||
Sbjct 3253067 TGATTCG-GGTTCCTTTCGCTCGAATACAATGAACATTGAGACCAATTCCACCAGCATAT 3253125
Query 26222 TTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTC 26281
|| ||||| ||||||| | |||||| | ||||||| || ||||| | ||
Sbjct 3253126 TTAGAAATCAAATTACAATCTTTCAAAGTATCGGATATTCCTTCAATACTATCTTCCCTC 3253185
Query 26282 ATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTC 26341
||| ||| | ||||||| ||||| || | ||| ||| || | |||||| | ||
Sbjct 3253186 ATTGATAAAAGAAAACAACTAGATAGCTGAGGTCGAGGTGTACCAGCATTAAAAAGGGTA 3253245
Query 26342 GGTGTAGCATGAGTA 26356
|| | |||||| |||
Sbjct 3253246 GGAGAAGCATGTGTA 3253260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038023204075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |