Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq447 87.8 2e-12 >seq447 Length=3773812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| ||||| | | | ||||||||||| | | ||||| ||||| || || Sbjct 2085281 CCATGATAAATAGCATACATTGCTGACATATTTGCCAATAAAGCTTGGGCTGTACAAATA 2085340 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || |||||||| |||| || |||||| || |||||||| || |||||||||| | Sbjct 2085341 TTTGATGTTGCTTTATCTCGTCGAATATGTTGTTCTCTAGTCTGAAGTGCTAATCGAACT 2085400 Query 139392 GCAGGATTGCC 139402 |||||||| || Sbjct 2085401 GCAGGATTACC 2085411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993760775320