Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq450 116 4e-21
>seq450
Length=3639652
Score = 116 bits (128), Expect = 4e-21
Identities = 241/359 (67%), Gaps = 0/359 (0%)
Strand=Plus/Minus
Query 177607 TCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGA 177666
|| |||| || ||||| ||||||||||||||||| ||||||||||| || || ||||||
Sbjct 785793 TCTTCAGGCTTGTCTTGCTGAAGCATGAGCCACATAGCTTCAACATAATCTTTCGCATGA 785734
Query 177667 CCCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACA 177726
||||||||||| |||| | |||||| ||||| | | || |||||| | |
Sbjct 785733 CCCCAGTCTCTTTTGGCGTCTAAGTTACCTAGTTCGATATAGTCCAACTCACCGATAGAA 785674
Query 177727 ATTTGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGAT 177786
|| | || || |||||| || || ||||| |||||| ||| || |
Sbjct 785673 ATCTTGGCAACACCTCTAGTAATTTTACGGGTAACAAAAGTTTCACCTCTTCTAGGGCTT 785614
Query 177787 TCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTG 177846
|| || || || | || || | ||| |||| || | ||| || || ||
Sbjct 785613 TCATGATTAAATAAAATACCATTGACTGCAAACATGTTGTATGCTTCACGATAGTTGACA 785554
Query 177847 ACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTC 177906
|| | ||||| | | |||||| | || || || |||| ||| ||||| |||||
Sbjct 785553 ACTATCCAGTAACCATACAATTTAGCAACACCGTAAGGCGATCTTGGATAGAAAGGTGTT 785494
Query 177907 TCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
| ||| ||||||| ||||| ||||||||||| | | || |||||| ||||| ||
Sbjct 785493 TTTTCATTTTGTGGTATTTCTTGGACTTTACCATAAAGTTCACTAGTTGATGCTTGATA 785435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564819986080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |