Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq444 123 4e-23
seq453 93.3 8e-14
>seq444
Length=5217058
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | ||| | ||| | ||| || || | ||||| ||| || ||||| ||
Sbjct 3541572 ACCACCACGAAGTCGTAATACTAAATGTAAAGTTGATTCTTTCTGAATGTTGTAGTCAGA 3541631
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| |||| | ||| || | ||||| || || || || | | |||||||||||| ||
Sbjct 3541632 AAGGGTTCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGACGCTGTTGATCAGGTGG 3541691
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| ||||| | || | |||| ||| || ||||||| |||||
Sbjct 3541692 GATTCCTTCCTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAAC 3541751
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| | || || |||||||| || || ||||| || || ||||||||
Sbjct 3541752 TTCCAAGGTGATGGTTTTACCAGTGAGGGTTTTGACGAAAATTTGCAT 3541799
>seq453
Length=2394413
Score = 93.3 bits (102), Expect = 8e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 38312 GGATCACAACCGTCaaaaaaaTATTTATCGTTTAAATATATAGCTTTATCTATGGCTTCT 38371
||||| | ||| || || | |||| || |||||||| ||||| | || | ||||||
Sbjct 2274674 GGATCGCGACCATCTAATTCAAATTTGTCATTTAAATAGATAGCGATTTCCAGTGCTTCT 2274733
Query 38372 TGAGGTGTTTTTGTCCATTCTATTAATTTTTTAGCCCAAAACATTCTCATGTAACCATTA 38431
| || | ||| ||||||||| || |||||||||||| |||||||||||||||||| |
Sbjct 2274734 TCCGGAGATTTACTCCATTCTAGTATCTTTTTAGCCCAATACATTCTCATGTAACCATGA 2274793
Query 38432 A 38432
|
Sbjct 2274794 A 2274794
Score = 84.2 bits (92), Expect = 4e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 38312 GGATCACAACCGTCaaaaaaaTATTTATCGTTTAAATATATAGCTTTATCTATGGCTTCT 38371
||||| ||||| || || | |||| | |||||||| ||||| | || | ||||||
Sbjct 2285471 GGATCGCAACCATCTAATTCAAATTTGTTATTTAAATAGATAGCGATTTCCAGTGCTTCT 2285530
Query 38372 TGAGGTGTTTTTGTCCATTCTATTAATTTTTTAGCCCAAAACATTCTCATGTAACCATTA 38431
| || | || ||||||||| || |||||||||||| ||||||||||||| |||| |
Sbjct 2285531 TCCGGAGATTCACTCCATTCTAGTATCTTTTTAGCCCAATACATTCTCATGTAGCCATGA 2285590
Query 38432 A 38432
|
Sbjct 2285591 A 2285591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899647191519120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |