Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq450 178 2e-39
>seq450
Length=3639652
Score = 178 bits (196), Expect = 2e-39
Identities = 426/642 (66%), Gaps = 2/642 (0%)
Strand=Plus/Plus
Query 161150 ATCATTAAGGAAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAA 161209
|| ||||| || || | |||||||| || ||||| ||| || || || ||||| |||
Sbjct 785270 ATAATTAATGAGATAAAGCCTGATGAAATATACAATTTAGCAGCTCAAAGCCATGTCAAA 785329
Query 161210 GTATCTTTCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTA 161269
|| || |||||| ||||||||| ||| | ||||| | ||||| ||||||||
Sbjct 785330 GTTTCATTCGAGCTGAGTGAATATACTGCAAATGTAGATGCAATTGGAACTTTAAGAGTA 785389
Query 161270 TTGGAGGCAGTTCGTCTCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACC 161329
|| || || | | | || || | | || | || || ||||| ||
Sbjct 785390 TTAGATGCTATCAGAAGCTGTGGATTGGGAACCAAAGTTAAATTTTATCAAGCATCAACT 785449
Query 161330 AGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCA 161389
||||| | ||||| || ||||| | |||||| || |||| |||||||||||| |||
Sbjct 785450 AGTGAACTTTATGGTAAAGTCCAAGAAATACCACAAAATGAAAAAACACCTTTCTATCCA 785509
Query 161390 CGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAG 161449
|||| || || || || |||||| | ||||| || ||||| || ||||| | ||
Sbjct 785510 AGATCGCCTTACGGTGTTGCTAAATTGTATGGTTACTGGATAGTTGTCAACTATCGTGAA 785569
Query 161450 AGTTATGGGATGCACGCCAGT-AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGG 161508
|| ||| | |||| | ||||||| |||| || ||||| || || | ||
Sbjct 785570 GCATACAACATGTTTG-CAGTCAATGGTATTTTATTTAATCATGAAAGCCCTAGAAGAGG 785628
Query 161509 TGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACA 161568
||| ||||| || |||||||| |||||||| || | || ||| || ||
Sbjct 785629 TGAAACTTTTGTTACCCGTAAAATTACTAGAGGTGTTGCCAAGATTTCTATCGGTGAGTT 785688
Query 161569 GGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTA 161628
||| | | | | |||||||| || || | | | |||| ||||||||||| |||| ||
Sbjct 785689 GGACTATATCGAACTAGGTAACTTAGACGCCAAAAGAGACTGGGGTCATGCGAAAGATTA 785748
Query 161629 TGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCAC 161688
||| || ||||||||| | ||| | || || || | ||||| || | ||||| |||||
Sbjct 785749 TGTTGAAGCTATGTGGCTCATGCTTCAGCAAGACAAGCCTGAAGATTTCGTGATAGCCAC 785808
Query 161689 AGGTAAAGAGTATTCAGTGAAGGACTTTGTAGAGGCATCTGCTGAATACTTTGGTATGAA 161748
|| |||| | || || ||||| || | | | || | | || | ||
Sbjct 785809 TGGAAAAGCTCAAAGTGTTCGCGAGTTTGTTGAAGAAGCATTCAAACATGTCGGCAAAAA 785868
Query 161749 GATTGAGTGGCAGGGTGAAGGATTGGATGAAGTGGGTATAGA 161790
||||| ||| | || ||||||| ||||| ||||||| |||
Sbjct 785869 CATTGAATGGGAAGGAAAAGGATTAGATGAGGTGGGTAAAGA 785910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729923751439080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |