Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq450 178 2e-39 >seq450 Length=3639652 Score = 178 bits (196), Expect = 2e-39 Identities = 426/642 (66%), Gaps = 2/642 (0%) Strand=Plus/Plus Query 161150 ATCATTAAGGAAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAA 161209 || ||||| || || | |||||||| || ||||| ||| || || || ||||| ||| Sbjct 785270 ATAATTAATGAGATAAAGCCTGATGAAATATACAATTTAGCAGCTCAAAGCCATGTCAAA 785329 Query 161210 GTATCTTTCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTA 161269 || || |||||| ||||||||| ||| | ||||| | ||||| |||||||| Sbjct 785330 GTTTCATTCGAGCTGAGTGAATATACTGCAAATGTAGATGCAATTGGAACTTTAAGAGTA 785389 Query 161270 TTGGAGGCAGTTCGTCTCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACC 161329 || || || | | | || || | | || | || || ||||| || Sbjct 785390 TTAGATGCTATCAGAAGCTGTGGATTGGGAACCAAAGTTAAATTTTATCAAGCATCAACT 785449 Query 161330 AGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCA 161389 ||||| | ||||| || ||||| | |||||| || |||| |||||||||||| ||| Sbjct 785450 AGTGAACTTTATGGTAAAGTCCAAGAAATACCACAAAATGAAAAAACACCTTTCTATCCA 785509 Query 161390 CGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAG 161449 |||| || || || || |||||| | ||||| || ||||| || ||||| | || Sbjct 785510 AGATCGCCTTACGGTGTTGCTAAATTGTATGGTTACTGGATAGTTGTCAACTATCGTGAA 785569 Query 161450 AGTTATGGGATGCACGCCAGT-AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGG 161508 || ||| | |||| | ||||||| |||| || ||||| || || | || Sbjct 785570 GCATACAACATGTTTG-CAGTCAATGGTATTTTATTTAATCATGAAAGCCCTAGAAGAGG 785628 Query 161509 TGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACA 161568 ||| ||||| || |||||||| |||||||| || | || ||| || || Sbjct 785629 TGAAACTTTTGTTACCCGTAAAATTACTAGAGGTGTTGCCAAGATTTCTATCGGTGAGTT 785688 Query 161569 GGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTA 161628 ||| | | | | |||||||| || || | | | |||| ||||||||||| |||| || Sbjct 785689 GGACTATATCGAACTAGGTAACTTAGACGCCAAAAGAGACTGGGGTCATGCGAAAGATTA 785748 Query 161629 TGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCAC 161688 ||| || ||||||||| | ||| | || || || | ||||| || | ||||| ||||| Sbjct 785749 TGTTGAAGCTATGTGGCTCATGCTTCAGCAAGACAAGCCTGAAGATTTCGTGATAGCCAC 785808 Query 161689 AGGTAAAGAGTATTCAGTGAAGGACTTTGTAGAGGCATCTGCTGAATACTTTGGTATGAA 161748 || |||| | || || ||||| || | | | || | | || | || Sbjct 785809 TGGAAAAGCTCAAAGTGTTCGCGAGTTTGTTGAAGAAGCATTCAAACATGTCGGCAAAAA 785868 Query 161749 GATTGAGTGGCAGGGTGAAGGATTGGATGAAGTGGGTATAGA 161790 ||||| ||| | || ||||||| ||||| ||||||| ||| Sbjct 785869 CATTGAATGGGAAGGAAAAGGATTAGATGAGGTGGGTAAAGA 785910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729923751439080