Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq443 91.5 1e-13 >seq443 Length=6836010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 111721 TGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCA 111780 ||||| ||||| ||| ||||| || || ||| || || || | |||||| || Sbjct 505568 TGATTCTTATAAATATGTGCATCACCAATTTGATGAATGAACTCTCCAGGCTCTAAGTTT 505627 Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 || | ||||| ||||| | || | | | ||| || |||| || ||||| || ||| Sbjct 505628 GTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATGGTACTCCT 505687 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAA 111900 | ||||||||| | |||||||| | || |||| || | |||| | | |||||| Sbjct 505688 AAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAGTTACATAA 505747 Query 111901 AATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 |||||| | | |||||| |||||||||||||| Sbjct 505748 AATTGAAACAAACAATGACATGGAGGCAATGCCAT 505782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391942538047483