Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq450 86.0 7e-12 >seq450 Length=3639652 Score = 86.0 bits (94), Expect = 7e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 158939 CAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGG 158998 ||| ||||||||| | || || | | |||||| || ||||| || || || || | Sbjct 785840 CAACAAACTCGCGAACACTTTGAGCTTTTCCAGTGGCTATCACGAAATCTTCAGGCTTGT 785781 Query 158999 GCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCT 159058 || || |||||||||||||| || || || ||||| | ||| ||||||||||| | | Sbjct 785780 CTTGCTGAAGCATGAGCCACATAGCTTCAACATAATCTTTCGCATGACCCCAGTCTCTTT 785721 Query 159059 TGGCATCCATGTTCCCGAGCTCGAT 159083 |||| || | ||| || || ||||| Sbjct 785720 TGGCGTCTAAGTTACCTAGTTCGAT 785696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211615431800