Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq444 105 4e-18
>seq444
Length=5217058
Score = 105 bits (116), Expect = 4e-18
Identities = 167/235 (71%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| || || ||||| || || || ||| ||||||||||| |||||
Sbjct 3542377 CCACCACGAAGTCGTAAGACCAAGTGAAGGGTAGACTCTTTTTGAATGTTGTAATCGCTC 3542436
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | |||||||| |||||||| || || || ||||||||||| || || ||
Sbjct 3542437 AGGGTACGTCCATCTTCAAGCTGTTTACCAGCGAAGATCAAACGCTGTTGATCGGGTGGG 3542496
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCT--CTCC 34656
| || ||||||||| |||| || | |||||| | ||| ||||| || | ||
Sbjct 3542497 ATACCTTCCTTGTCTTGGATC-TTGGCTTTAACATTTTCAATAGTGTC--CGATGGTTCA 3542553
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| || | ||| || ||||| || || | || || || ||||| |||||| |||
Sbjct 3542554 ACCTCAAGGGTGATGGTTTTTCCAGTAAGAGTCTTGACGAAAATTTGCATGATGA 3542608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727141273353
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |