Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq443 89.7 5e-13 >seq443 Length=6836010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 125421 CAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGCTACGCACTATTG 125480 ||| |||||||||| | ||||||||||||||||||| | || |||||| | | || Sbjct 505710 CAAAGATCAGCAGATATGGGTTTAGGAGTACCATTCAATGTTGCCAGCTACTCTATTTTA 505651 Query 125481 ACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATTCATACCTTTGGT 125540 ||||| | |||||| | | ||| ||| | || ||| | ||||||||| ||||| Sbjct 505650 ACTCATATGATCGCACATGTTACAAACTTAGAGCCTGGAGAGTTCATTCATCAAATTGGT 505591 Query 125541 GACGCTCATATCTATAACAACCACATTGA 125569 || || ||||| ||||| || || |||| Sbjct 505590 GATGCACATATTTATAAGAATCATGTTGA 505562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484402518693720