Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20]
641 sequences; 90,828,597 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq443 96.9 3e-15
>seq443
Length=6836010
Score = 96.9 bits (106), Expect = 3e-15
Identities = 159/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 118473 CTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGG-TG 118531
||||| |||||| |||| | ||| ||||| |||||| ||| ||||| || ||||| |
Sbjct 505561 CTCAACATGATTCTTATAAATATGTGCATCACCAATTTGATGAATGAACTCTCCAGGCTC 505620
Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAG 118591
|||| ||| | || || ||||| | || || | | ||||||||| ||||| || |
Sbjct 505621 TAAGTT-TGTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATG 505679
Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651
| || || | |||||| ||||||||||| |||| | | | || || | | || | |
Sbjct 505680 GTACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAG 505739
Query 118652 CAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698
|||||||| ||| | ||||||||||||| ||||| ||
Sbjct 505740 TTACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAAA 505786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414473562029524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |