Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetranychus_20urticae_20[refseq_20GCF_5F000239435.1_202011-12-20] 641 sequences; 90,828,597 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq443 96.9 3e-15 >seq443 Length=6836010 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 118473 CTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGG-TG 118531 ||||| |||||| |||| | ||| ||||| |||||| ||| ||||| || ||||| | Sbjct 505561 CTCAACATGATTCTTATAAATATGTGCATCACCAATTTGATGAATGAACTCTCCAGGCTC 505620 Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAG 118591 |||| ||| | || || ||||| | || || | | ||||||||| ||||| || | Sbjct 505621 TAAGTT-TGTAACATGTGCGATCATATGAGTTAAAATAGAGTAGCTGGCAACATTGAATG 505679 Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651 | || || | |||||| ||||||||||| |||| | | | || || | | || | | Sbjct 505680 GTACTCCTAAACCCATATCTGCTGATCTTTGGTCGAGTCGACAGGACAATTTACCATCAG 505739 Query 118652 CAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAA 118698 |||||||| ||| | ||||||||||||| ||||| || Sbjct 505740 TTACATAAAATTGAAACAAACAATGACATGGAGGCAATGCCATGAAA 505786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414473562029524