Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5502 89.7 5e-13 >seq5502 Length=7310 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 119089 TCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGC 119148 ||||| | || | ||||||| |||||||| || |||||||||||||| | | |||||| Sbjct 5991 TCCGGCGACTCAGTCCATTCGAGTATTTTCTTCGCCCAGTACATACGCAGGAAGCCGTGC 5932 Query 119149 ATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACG 119207 ||||| |||||| | || ||| | ||| |||| |||||| ||| ||||| || || Sbjct 5931 ATTTTGCCCTCGCGCACCAGCTGCAATTGCGCGGCGTTCCACAGATCGTCGTGGGTGCG 5873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511202380375120