Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq13683 111 3e-20 >seq13683 Length=3702 Score = 111 bits (122), Expect = 3e-20 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 12430 CATAAGGGCACGATAGGTGCAATCCGGCGTGTGGTGGAGCCGCTCGGCTATCTCATCAAC 12489 || || || ||||| || ||| | || |||||||| ||||| | || ||| | || Sbjct 1295 CACAAAGGTACGATTGGCGCATTGCGTCGTGTGGTTGAGCCATTGGGTTATTTAATTCGG 1354 Query 12490 GTGACGGAGTGGTGGGAAAACAGTGACCCGCCCGGCACCTTCCGGCTTGATATTGGTGTA 12549 || | ||||||||| ||| | || | ||||||| || || |||||||| || || Sbjct 1355 GTTATTGAGTGGTGGAAAACTAACGAAACCGCCGGCACGTTTCGTCTTGATATCGGGGTG 1414 Query 12550 CTGGAAAGCGGTATCACAGAGGCAATGTATCAGGAAATGGAACGGCTGATTGCTGATGCC 12609 || |||| ||||| || || | ||||||||| || | ||| ||||| |||||| Sbjct 1415 CTTGAAACGGGTATTACTGAAGAAATGTATCAAGAGTTAGAAGCATTGATTTTTGATGCA 1474 Query 12610 AAACCTGCAAGCCGTCACCTTATTGGCCT 12638 ||||| || |||||||||||||| || || Sbjct 1475 AAACCGGCGAGCCGTCACCTTATCGGTCT 1503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107333710365060